Data Publication

Database of in-situ Raman spectra from Na2H2ATP solutions at 80,100 and 120 °C and up to 1666 MPa for determination of the rate constant of the ATP hydrolysis

Moeller, Christoph | Schmidt, Christian | Testemale, Denis | Guyot, François | Kokh, Maria | Wilke, Max

GFZ Data Services

(2023)

Descriptions

In biochemical systems, enzymes catalyze the endergonic phosphorylation of adenosine diphos-phate (ADP) to adenosine triphosphate (ATP) by different pathways, e.g., oxidative phosphoryla-tion catalyzed by membrane bound ATP synthase or substrate-level phosphorylation. The stored energy is released by the enzymatically controlled exergonic hydrolysis of ATP to power other vital endergonic reactions; therefore, ATP is widely known as the universal energy currency. Rapid abiotic ATP hydrolysis kinetics thus means higher maintenance energy costs for cells, and it has been suggested that this is an important factor in setting the limits to the functioning of living organisms (Bains et al. 2015). In order to evaluate the running conditions of the in-situ procedure by Moeller et al. (2022) using Raman spectroscopy opened up an efficient way of obtaining further insights to the effects of P-T- ionic composition on the kinetics of ATP-ADP hy-drolysis. Raman spectroscopy can be combined with a hydrothermal diamond anvil cell, which provides an isochoric system for measurements up to pressures of 2000 MPa. Another system for in-situ Raman spectroscopy at elevated pressures and temperatures is based on an autoclave fitted with optical high-pressure windows, as shown by Louvel et al. (2015) and works up to 200 MPa. In this system, pressure and temperature can be controlled independently, so that isobaric temperature series are possible. This data publication compromises all Raman spectra measured in-situ of Na2H2ATP solutions at 80, 100 and 120 °C and up to 1666 MPa to determine the rate constants of the hydrolysis of adenosine triphosphate (ATP) to adenosine diphosphate (ADP) at 48 different P-T conditions. Furthermore, an assignment of peaks in the fitted range, the initial fit parameters and the fit-results are provided. Besides the kinetic data, the pH of the ATP solutions was calculated at experimental temperature and pressure conditions.

Keywords


Originally assigned keywords
ATP
adenosine triphosphate
ADP
adenosine diphosphate
AMP
adenosine monophosphate
In-situ Raman spectroscopy
Autoclave
Hydrothermal diamond anvil cell
HDAC
Hydrolysis
Kinetics
biosphere > biological process > animal life > metabolism > metabolite
chemical process > chemical reaction > reaction kinetics
EARTH SCIENCE > OCEANS > MARINE VOLCANISM > HYDROTHERMAL VENTS

MSL enriched keywords
Technique
chemical and mineralogical analysis
Raman spectrometry - chemistry and mineralogy
crystal structure analysis
Raman spectrometry - crystal lattice
minerals
chemical elements
carbon
diamond
Apparatus
deformation testing
compression testing
diamond anvil cell
measured property
pH

Metadata


MSL enriched sub domains

microscopy and tomography
rock and melt physics
geochemistry

Resource Type

Dataset


Source


Source publisher

GFZ Data Services

DOI

10.5880/fidgeo.2023.031

Creators

Moeller, Christoph
Personal
Institute of Geosciences, University of Potsdam, Potsdam, Germany
Schmidt, Christian
Personal
GFZ German Research Centre for Geosciences, Potsdam, Germany
Testemale, Denis
Personal
Néel Institute, Univ. Grenoble Alpes, Grenoble, France
Guyot, François
Personal
IMPMC Muséum National d'Histoire Naturelle, Paris, France
Kokh, Maria
Personal
Institut für Geowissenschaften, Potsdam, Germany; Institut für Mineralogie, Münster, Germany
Wilke, Max
Personal
Institute of Geosciences, University of Potsdam, Potsdam, Germany

Contributors

Moeller, Christoph
Personal
Institute of Geosciences, University of Potsdam, Potsdam, Germany
Moeller, Christoph
Personal
Institute of Geosciences, University of Potsdam, Potsdam, Germany
Schmidt, Christian
Personal
GFZ German Research Centre for Geosciences, Potsdam, Germany
Testemale, Denis
Personal
Néel Institute, Univ. Grenoble Alpes, Grenoble, France
Guyot, François
Personal
IMPMC Muséum National d'Histoire Naturelle, Paris, France
Kokh, Maria
Personal
Institut für Geowissenschaften, Potsdam, Germany; Institut für Mineralogie, Münster, Germany
Wilke, Max
Personal
Institute of Geosciences, University of Potsdam, Potsdam, Germany
Hydrothermal Diamond-Anvil Cell Laboratory
GFZ German Research Centre for Geosciences, Potsdam, Germany
Laboratory Of Fundamental Research In Condensed Matter Physics
Néel Institute, Grenoble, France
Moeller, Christoph
Personal
Institute of Geosciences, University of Potsdam, Potsdam, Germany
Moeller, Christoph
Personal
Institute of Geosciences, Potsdam, Germany

Citation

Moeller, C., Schmidt, C., Testemale, D., Guyot, F., Kokh, M., & Wilke, M. (2023). Database of in-situ Raman spectra from Na2H2ATP solutions at 80,100 and 120 °C and up to 1666 MPa for determination of the rate constant of the ATP hydrolysis [Data set]. GFZ Data Services. https://doi.org/10.5880/FIDGEO.2023.031


References


Dates

Issued 2023

Language

- no language entry found -



Rights

Name Creative Commons Attribution 4.0 International
URI https://creativecommons.org/licenses/by/4.0/legalcode
Identifier cc-by-4.0
Identifier Scheme SPDX
Scheme URI https://spdx.org/licenses/

Locations

- no geo-locations found -